post.kai@scrippshealth.org The Scripps Translational Science Institute CTSA None No Oracle database containing sample inventory information, phenotype data, laboratory process status and genomic/genetic data. Accessible by internal web sites Kai Post Genomic Medicine LIMS The Scripps Research Institute No post.kai@scrippshealth.org None Kai Post The Scripps Research Institute Custom scripts integrating Solexa/Illumina sequence analysis with LIMS, downstream alignment and variant detection packages The Scripps Translational Science Institute Sequence Analysis Pipeline CTSA No No C/NExT Yes None The Scripps Translational Science Institute CTSA The Scripps Research Institute Tumor registry storing patient specific data including relevant patient details, DXs, ICDO (oncology specific coding), tumor size, grade, stage, and histologic tumor subtype. Software provided by State of California as part of the California Cancer Registry (CCR) program. Yes The Scripps Translational Science Institute CTSA Website for the Scripps Translational Science Institute research projects, events, press, founders, more. herrell.todd@scrippshealth.org; mmiller@sdsc.edu The Scripps Research Institute STSI website Available Yes Todd Herrell / Mark Miller Clinic Data Warehouse None No The Scripps Research Institute No The Scripps Translational Science Institute Oracle data warehouse containing clinical data on roughly 2 million ambulatory/clinic patients, including DXs, demographics, clinic visits, and lab results. CTSA The Scripps Translational Science Institute No No Enterprise Data Warehouse The Scripps Research Institute SQL Server data warehouse containing clinical data on roughly 1.3 million hospital inpatients, including patient DXs, procedures (surgeries & other), demographics, length of stay, charges & applied costs. None CTSA GE Centricity (EHR) The Scripps Translational Science Institute Inpatient Electronic Hospital Record (EHR) system with associated data repository. Application upgrade in process, to go live 11/2008. No Yes The Scripps Research Institute None CTSA The Scripps Translational Science Institute MDMR; SNPEM; GESNP On-line data analysis tools for multivariate analysis (MDMR); haplotype analysis (SNPEM); SNP identification from gene expression experiments (GESNP) Yes CTSA gfzhang@scripps.edu None The Scripps Research Institute Guangfa Zhang Yes